[elastix] Elastix Ubuntu New User

Robinson, Jamie j.robinson.10 at aberdeen.ac.uk
Tue Aug 9 19:55:02 CEST 2011

I am working on developing some software that compares two nuclear medicine whole body bone scans both intra and intersubject. Previously, I have used a registration package bUnwarpJ  in ImageJ for this purpose. However, I was not satisfied with the results (it uses a simple sum of squared intensity differences as a metric) and would now like to try something a bit more sophisticated and stumbled across elastix.

I followed the user manual on how to install the package and downloaded the default parameter configuration files. However, upon running the command

elastix -f FS1.dcm -m FS2.dcm -p ParameterFiles/Parameters_Affine.txt -p ParameterFiles/Parameters_BSpline.txt -out .

I am met with a whole bunch of warnings before the software fails. I have attached the log file but have no idea why the software fails. Can anyone offer any help.

-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://lists.bigr.nl/pipermail/elastix/attachments/20110809/617f1f45/attachment.html>
-------------- next part --------------
A non-text attachment was scrubbed...
Name: elastix.log
Type: text/x-log
Size: 12236 bytes
Desc: elastix.log
URL: <http://lists.bigr.nl/pipermail/elastix/attachments/20110809/617f1f45/attachment.bin>

More information about the Elastix mailing list