[elastix] Elastix Ubuntu New User
s.klein at erasmusmc.nl
Tue Aug 9 22:57:25 CEST 2011
Thanks for your interest in elastix. The warnings are not a problem.
They just inform you that some parameters were not specified and that
elastix takes a default value.
The error means that the fixed and moving image do not have a
sufficiently large initial overlap. Or maybe your moving image is much
smaller than your fixed image. Could you email us:
- The size of the images
- The voxel size
On 9-8-2011 19:55, Robinson, Jamie wrote:
> I am working on developing some software that compares two nuclear
> medicine whole body bone scans both intra and intersubject.
> Previously, I have used a registration package bUnwarpJ in ImageJ for
> this purpose. However, I was not satisfied with the results (it uses a
> simple sum of squared intensity differences as a metric) and would now
> like to try something a bit more sophisticated and stumbled across
> I followed the user manual on how to install the package and
> downloaded the default parameter configuration files. However, upon
> running the command
> elastix -f FS1.dcm -m FS2.dcm -p ParameterFiles/Parameters_Affine.txt
> -p ParameterFiles/Parameters_BSpline.txt -out .
> I am met with a whole bunch of warnings before the software fails. I
> have attached the log file but have no idea why the software fails.
> Can anyone offer any help.
> elastix mailing list
> elastix at bigr.nl
-------------- next part --------------
An HTML attachment was scrubbed...
More information about the Elastix